miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Cynodon dactylon



ABOUT THIS RECORD

ID: MNEST000526
species: Cynodon dactylon
miRNA family: MIR156
source: miRNEST

Taxonomy by NCBI:
Cynodon dactylon Cynodon Eleusininae Cynodonteae Chloridoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGACAGAAGAGAGTGAGCACA

miRNA*
TGCTCGCTCCTCTTTCTGTCAGC

mismatches: 2
bulges: 2

View larger
pre-miRNA
CTTATACGGCCCTGGAGAGATTGACAGAAGAGAGTGAGCACACGGGGCGGCGGTCGGCACTGGACGTGTGTCGTCCCCGCCGCGTGCTCGCTCCTCTTTC
TGTCAGC
CTCTCTCTTGTCCAAGGC


dot-bracket secondary structure
.......(((...(((((((((((((((((.((((((((((.....(((((((.((((((.......))))))...)))))))))))))))))...))))
)))))).
.))))))).)))......



SIMILARITIES
miRBase sbi-MIR156e: 8e-27

PMRD sbi-miR156e: 8e-27

microPC miR156: 0.000000006
UniProt no hits

RFAM mir-156: 0.00000000000003
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;